BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H04SP1|AL429124
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1324 1655 0.0
>3x_Contig1324
Length = 5803
Score = 1655 bits (827), Expect = 0.0
Identities = 856/873 (98%)
Strand = Plus / Plus
Query: 1 atgttggttgacgccattcatttaaccatgacaaatagacaacaaatgcaaacttggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 atgttggttgacgccattcatttaaccatgacaaatagacaacaaatgcaaacttggaga 988
Query: 61 aagtcgcgtagactaatggcatactctactgttggtactccggattatattgcacctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 aagtcgcgtagactaatggcatactctactgttggtactccggattatattgcacctgaa 1048
Query: 121 attttcctgtaccaaggttatggtcaggaatgtgattggtggtcattaggagctattatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 attttcctgtaccaaggttatggtcaggaatgtgattggtggtcattaggagctattatg 1108
Query: 181 tacgagtgtctaattggttggcctccattttcctctgaaacaccacaagaaacgtatcgt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1109 tacgagtgtctaattggttggcctccattttgctctgaaacaccacaagaaacgtatcgt 1168
Query: 241 aagatcatgaatttcgaacaaactttgcaattccccgatgatattcatatttcttatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 aagatcatgaatttcgaacaaactttgcaattccccgatgatattcatatttcttatgaa 1228
Query: 301 gctgaagatctaatcagaagattgttaactcactctgaaaatcgtctaggtagacatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 gctgaagatctaatcagaagattgttaactcactctgaaaatcgtctaggtagacatggt 1288
Query: 361 ggtgccgatgaaattaaggcacatcctttcttcagtggtgttgattggaacactatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 ggtgccgatgaaattaaggcacatcctttcttcagtggtgttgattggaacactatcagg 1348
Query: 421 caagtggaagctccttatattcctaacttgtccagtgtcacagatactaggttcttccca 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1349 caagtggaagctccttatattcctaagttgtccagtgtcacagatactaggttcttccca 1408
Query: 481 actgatgaattacaaaatctccctcattcaccagcaatggcacaagctgcaagacaaaga 540
|||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1409 actgatgaattagaaaatgtccctgattcaccagcaatggcacaagctgcaagacaaaga 1468
Query: 541 gaacagatgatgacacagcaacaaggggttcctcaatccaatgcaaaggaagatttacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 gaacagatgatgacacagcaacaaggggttcctcaatccaatgcaaaggaagatttacca 1528
Query: 601 ttcatcgggtacacgtactctaggtttgattatctaactagaaagaatgckctatagtaa 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1529 ttcatcgggtacacgtactctaggtttgattatctaactagaaagaatgctctatagtaa 1588
Query: 661 cgckctctgtacataaccgsgacggaagtksctaaatataataaaataarcgaaagtbag 720
||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 1589 cgctctctgtacataaccgcgacggaagttcctaaatataataaaataaacgaaagtaag 1648
Query: 721 ahatactascaagaattataaacattacggkcattaaagtggrgaaaatgtagatacagc 780
| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1649 aaatactaccaagaattataaacattacggtcattaaagtggagaaaatgtagatacagc 1708
Query: 781 tgattcccaatagatcataatcaaattgactcaatatcaggsgcccagcaacgtacttgg 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1709 tgattcccaatagatcataatcaaattgactcaatatcaggcgcccagcaacgtacttgg 1768
Query: 841 tattaaatctacgcttcaacacaaattattaaa 873
|||||||||||||||||||||||||||||||||
Sbjct: 1769 tattaaatctacgcttcaacacaaattattaaa 1801
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5565
Number of Sequences: 1807
Number of extensions: 5565
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)